CDS

Accession Number TCMCG057C26685
gbkey CDS
Protein Id XP_018491723.1
Location complement(join(29905261..29905374,29905461..29905645,29905770..29905986,29906504..29906605,29906773..29906835,29907196..29907321,29907416..29907556,29907631..29907641,29907821..29907968,29908115..29908243,29908420..29908557,29908642..29908710,29908787..29908855,29909246..29909404,29909495..29909595,29909691..29909841,29909921..29910080,29910199..29910331,29910461..29910638,29910730..29910966,29911065..29911133,29911303..29911402,29911552..29911607))
Gene LOC108862173
GeneID 108862173
Organism Raphanus sativus

Protein

Length 951aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018636221.1
Definition PREDICTED: villin-3 isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category Z
Description actin filament capping
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
ko04812        [VIEW IN KEGG]
KEGG_ko ko:K05761        [VIEW IN KEGG]
ko:K05768        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04666        [VIEW IN KEGG]
ko04810        [VIEW IN KEGG]
ko05203        [VIEW IN KEGG]
map04666        [VIEW IN KEGG]
map04810        [VIEW IN KEGG]
map05203        [VIEW IN KEGG]
GOs GO:0001558        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003779        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0005884        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0007015        [VIEW IN EMBL-EBI]
GO:0008064        [VIEW IN EMBL-EBI]
GO:0008092        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010639        [VIEW IN EMBL-EBI]
GO:0010817        [VIEW IN EMBL-EBI]
GO:0015629        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030029        [VIEW IN EMBL-EBI]
GO:0030036        [VIEW IN EMBL-EBI]
GO:0030832        [VIEW IN EMBL-EBI]
GO:0030833        [VIEW IN EMBL-EBI]
GO:0030834        [VIEW IN EMBL-EBI]
GO:0030835        [VIEW IN EMBL-EBI]
GO:0030837        [VIEW IN EMBL-EBI]
GO:0031333        [VIEW IN EMBL-EBI]
GO:0032271        [VIEW IN EMBL-EBI]
GO:0032272        [VIEW IN EMBL-EBI]
GO:0032432        [VIEW IN EMBL-EBI]
GO:0032535        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0032956        [VIEW IN EMBL-EBI]
GO:0032970        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0040008        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043242        [VIEW IN EMBL-EBI]
GO:0043244        [VIEW IN EMBL-EBI]
GO:0043254        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044877        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051014        [VIEW IN EMBL-EBI]
GO:0051015        [VIEW IN EMBL-EBI]
GO:0051017        [VIEW IN EMBL-EBI]
GO:0051049        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051129        [VIEW IN EMBL-EBI]
GO:0051493        [VIEW IN EMBL-EBI]
GO:0051494        [VIEW IN EMBL-EBI]
GO:0051693        [VIEW IN EMBL-EBI]
GO:0061572        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090066        [VIEW IN EMBL-EBI]
GO:0097435        [VIEW IN EMBL-EBI]
GO:0099080        [VIEW IN EMBL-EBI]
GO:0099081        [VIEW IN EMBL-EBI]
GO:0099512        [VIEW IN EMBL-EBI]
GO:0099513        [VIEW IN EMBL-EBI]
GO:0110053        [VIEW IN EMBL-EBI]
GO:1901879        [VIEW IN EMBL-EBI]
GO:1901880        [VIEW IN EMBL-EBI]
GO:1902903        [VIEW IN EMBL-EBI]
GO:1902904        [VIEW IN EMBL-EBI]
GO:2000012        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTGGGCCAACAAAAGTATTGGATCCTGCATTTCAAGGAGCCGGGCAGAAACCAGGGACTGAATTCTGGAGAATCGAAAACTTTCAGCCAGTTTTAGTGCCCAAATCTGAACATGGAAAGTTTTATATGGGAGATACTTACATCGTCTTGCAGACAACACAGAATAAGGCGGGTGCTTATCTATTTGATATACATTTTTGGATTGGTAAAGATACAAGCCAGGATGAAGCTGGAACAGCAGCTGTGAAGACGGTTGAACTTGATGCAGGTCTCGGAGGCCGAGCTGTCCAACACCGTGAAATTCAAGGTCATGAATCTGACAAGTTCTTGTCTTACTTCAAGCCTTGCATTATACCGCTAGAGGGTGGTGTCGCCTCTGGATTTAAAAAACCCGAGGAGGAGAAATTTGAAACCCGGTTGTATACGTGCAAAGGGAAACGTGCTGTCCACTTGAAGCAGGTTCCTTTTGCTCGCTCATCACTGAATCATGATGATGTGTTTATCTTGGACACCAAGGAAAAGATTTATCAGTTTAATGGTGCGAATTCAAATATCCAAGAAAGAGCTAAAGCTTTGGTAGTCGTCCAATATTTGAAAGACAAGTTTCATGAAGGAACTTGTGACGTTGCTATCGTTGATGATGGAAAATTAGATACAGAATCAGATTCTGGCGAGTTCTGGGTCCTCTTTGGGGGTTTTGCTCCAATCGCAAGGAAAGTTGCTAGCGAGGATGACATTATTCCGGAGACAACTCCGCCTAAGCTTTATAGTATCGCTGACGGTCAGGTAGAATCTATAGATGGCAACTTATCCAAATCTATGCTGGAAAACAATAAATGCTACCTTCTGGACTGCGGTTCTGAAGTATTTATCTGGGTTGGCCGAGTTACTCAAGTTGAAGAGAGAAAAACTGCTATCCAAGCTGCTGAGGACTTTCTTGCTCGTGAAAATAGGCCAAAGGCAACACGAATAACCCGTGTTATCCAAGGTTATGAGCCCCATTCTTTCAAGTCTAACTTTGACTCTTGGCCATCAGGCTCGGCAACTCCAGCTAACGAAGAAGGACGAGGAAAAGTTGCTGCATTACTTAAACAACAAGGTGTTGGGTTAAAGGGCCTGTCAAAAAGCACACCAGTGAATGAGGATATTCCACCGCTGCTTGAAGGAGGTGGAAAGTTGGAGGTTTGGTACATTGATGGTAAGTCCAAGATTCCTTTATCCAAAGATGATGTCGGAAAGCTCTATTCTGGGGACTGCTATCTGGTCCTTTATGCCTACCATTCTGGTGAAAGGAAAGAAGACTACTTCTTGTGCTGCTGGTTTGGAAAGAATAGCATTCAGGAGGATCAAGAGACGGCAGTCCGTCTGGCGAGCACAATGACAAATTCGTTGAAGGGGAGACCAGTGCAGGCTCGTATATATGAGGGTAAAGAGCCTCCACAGTTTGTTGCGCTTTTTCAACATATGGTGGTCCTTAAGGGTGGTTTGAGCTCTGGTTACAAAAATAGTGTGACAGAGAAAGGTTCAACAGACGAAACCTACATGCCGGAATCAATAGCACTTATTCAAGTATCTGGAACTGGAGTTCACAATAACAAGGCATTACAAGTTGAAGCGGTGGCAACTTCGTTGAACTCTTACGATTGCTTCCTTCTACAGTCTGGTACTTCCATGTTCCTGTGGCATGGAAACCAAAGTACGCATGAGCAGCAAGAACTGGCGGCTAAAGTTGCTGAATTCTTAAAGCCTGGGATTACTATCAAGCACGCCAAGGAAGGAACGGAAAGCTCATCATTTTGGTTTGCACTTGGGGGAAAACAGAACTTCACCAGCAAGAAGGTTTCCCCTGAGATTGTCAGGGATCCTCACTTGTTCTCCTTTTCATTCAACAGAGGAAAATTCCAGGTTGAAGAGATTCACAATTTTGATCAAGATGACCTCTTGACGGAAGATATGCATTTACTAGATACTCACGCTGAAGTTTTTGTGTGGGTTGGTCAATGTGTGGACCCCAAGGAAAAGCAAACCGCCTTTGAGATTGGCCAAAGGTTCATAGATCTGGCTGGTTCCCTCGAAGGCTTGTCTCCAAAAGTTCCATTATACAAAATCACTGAGGGGAATGAACCGTGCTTCTTCACCACTTATTTCTCGTGGGATGCTACTAAAGCCACTGTGCAAGGAAATTCCTTCCAGAAGAAGGCAGCATCAGTACTTGGTACACACCACGTTGTGCAGGACCAATCTAGTGGTGGAAACCAAGGACCAAGGCAAAGGGCTGCTGCTCTGGCTGCCTTGACTTCCGCATTTAACTCTCCTTCTGGAAAGACAAGCTCTCCGAACCGGGACAGATCAAATGGAAATCAAGGTGGTGCAAGACAGAGGGCTGAAGCGTTAGCCGCATTATCATCCGCGTTCAACTCTACACCATCATCAAATTCACCTCCGCAAAGACCAGGATTGACAACTCGATCGTCACAAAGAGCAGCAGCACTGGCTGCTCTCTCGCAAGTTCTCACTAATGAGAAGAAGAAATCATCTGATACCAGCCCTTCCGCTGAAGCTGAAGATGAGAAACCCTTCTCAGAAGAATCTGCTGAAGCTAAGGAAGAAGAGGAAGTTTCACCTGCAGCAGACGTGATTGCTGAGGAAGCAGGAACAACTGGTGCAACTTTCACTTACCAACAGCTACAAGCTAAATCTGACAAACCAGTGAAAGGAATTGATTTCAAACGCAGAGAGGCTTACTTGTCTGAGGAAGAGTTCAAGACTGTATTTGGGATGGAGAAAGAAGCATTCTACAAATTGCCTAGGTGGAAGCAAGATTTGCTGAAGAAGAAATTCAACTTGTTCTAA
Protein:  
MSGPTKVLDPAFQGAGQKPGTEFWRIENFQPVLVPKSEHGKFYMGDTYIVLQTTQNKAGAYLFDIHFWIGKDTSQDEAGTAAVKTVELDAGLGGRAVQHREIQGHESDKFLSYFKPCIIPLEGGVASGFKKPEEEKFETRLYTCKGKRAVHLKQVPFARSSLNHDDVFILDTKEKIYQFNGANSNIQERAKALVVVQYLKDKFHEGTCDVAIVDDGKLDTESDSGEFWVLFGGFAPIARKVASEDDIIPETTPPKLYSIADGQVESIDGNLSKSMLENNKCYLLDCGSEVFIWVGRVTQVEERKTAIQAAEDFLARENRPKATRITRVIQGYEPHSFKSNFDSWPSGSATPANEEGRGKVAALLKQQGVGLKGLSKSTPVNEDIPPLLEGGGKLEVWYIDGKSKIPLSKDDVGKLYSGDCYLVLYAYHSGERKEDYFLCCWFGKNSIQEDQETAVRLASTMTNSLKGRPVQARIYEGKEPPQFVALFQHMVVLKGGLSSGYKNSVTEKGSTDETYMPESIALIQVSGTGVHNNKALQVEAVATSLNSYDCFLLQSGTSMFLWHGNQSTHEQQELAAKVAEFLKPGITIKHAKEGTESSSFWFALGGKQNFTSKKVSPEIVRDPHLFSFSFNRGKFQVEEIHNFDQDDLLTEDMHLLDTHAEVFVWVGQCVDPKEKQTAFEIGQRFIDLAGSLEGLSPKVPLYKITEGNEPCFFTTYFSWDATKATVQGNSFQKKAASVLGTHHVVQDQSSGGNQGPRQRAAALAALTSAFNSPSGKTSSPNRDRSNGNQGGARQRAEALAALSSAFNSTPSSNSPPQRPGLTTRSSQRAAALAALSQVLTNEKKKSSDTSPSAEAEDEKPFSEESAEAKEEEEVSPAADVIAEEAGTTGATFTYQQLQAKSDKPVKGIDFKRREAYLSEEEFKTVFGMEKEAFYKLPRWKQDLLKKKFNLF